To highlight the benefits users can expect from transitioning to the new petaflop system BRII, we gathered performance data of common benchmarks and applications on the other IU systems.
We plan to provide data on the following benchmarks/applications:
The HPC-systems benchmarked include:
- BRII Test System (This system is similar in architecture to Big Red II but smaller in size. The system is provided by Cray for testing purposes.)
|BigRed||Quarry||BRII Test System|
|CPUs||IBM PowerPC 970MP processors (dual-core)||Intel Xeon 5335 processors (quad-core)||AMD Opteron Interlagos (16 core)|
|Cores per node||4 (=2 CPUs)||8 (=2 CPUs)||32 (=2 CPUs)|
|Nodes||1024||370||20 XE6 + 8 XK6|
|RAM||8,192 GB||1,536 GB||768 GB|
|RAM per node||8 GB||8 GB / 16 GB||32 GB / 16 GB|
|Network||Myrinet 2000||1Gbit Ethernet||Gemini interconnect (ASIC)|
Benchmarks and Applications
This benchmark reveals the MPI capabilities of the different systems.
The HPC Challenge (HPCC) Benchmark.
NAMD is a parallel molecular dynamics code for large biomolecular systems.
IUMD is a classical molecular dynamics code for simulating dense nuclear matter in white dwarf stars, neutron stars and supernovae.
The mlRho software is a serial program that estimates mutation, recombination, and sequencing error rates from genome sequences.
The Weather Research and Forecasting (WRF) Model.